Biological sciences articles within Nature Communications

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  • Article |

    One of the five IL-17 receptors, IL-17RD lacks a motif thought to be required for downstream signalling. Melletet al. show that IL-17RD tunes IL-17A-dependent signalling; in its absence, MAPK signalling and neutrophil recruitment are impaired, but NF-κB activation is enhanced.

    • Mark Mellett
    • , Paola Atzei
    •  & Paul N. Moynagh

  • Article |

    The keeled sternum is a distinct skeletal element in extant birds. In this study, specimens of juvenile extinct birds—Enantiornithes—from the Early Cretaceous show a unique sequence of development in the sternum, suggesting differences between living birds and this extinct clade.

    • Xiaoting Zheng
    • , Xiaoli Wang
    •  & Zhonghe Zhou

  • Article
    | Open Access

    Sodium-gated ion channels open and close in response to the flow of ions. Here, McCusker et al.report the open structure of a sodium-gated ion channel pore from a bacterial homologue, and show, by comparison with the closed structure, that the movement of a C-terminal helix is sufficient to open the channel.

    • Emily C. McCusker
    • , Claire Bagnéris
    •  & B.A. Wallace

  • Article |

    Spider webs consist of scaffolding silk, which supports the cobweb, and gumfoot silk, which can detach easily from the web upon contact with prey. Here, these different mechanical demands are shown to be met by silk attachments of two distinct architectures using the same pyriform silk secretions.

    • Vasav Sahni
    • , Jared Harris
    •  & Ali Dhinojwala

  • Article |

    Adult neurogenesis in the mammalian brain is implicated in the storage and processing of memories. Vivaret al.label afferents to new dentate gyrus granule cells and find that they receive direct input from the perirhinal and lateral entorhinal cortex and that these inputs enable spatial pattern separation.

    • Carmen Vivar
    • , Michelle C. Potter
    •  & Henriette van Praag

  • Article |

    Endothelial cells provide a vital barrier system to the passage of water and ions but not large plasma proteins. Using fluorescently labelled dextrans, the authors show that regions of high or low adherens junction density differentially restrict the passage of molecules up to 70 kDa in size.

    • Sadiqa K. Quadri
    • , Li Sun
    •  & Jahar Bhattacharya

  • Article |

    In the inner ear, sound waves produce movements in hair cell sterocilia, triggering the opening of ion channels. Hakizimana and colleagues show that the resultant currents change the length of sterocilia, and that these length changes alter the efficiency by which sound is converted into electrical signals.

    • Pierre Hakizimana
    • , William E. Brownell
    •  & Anders Fridberger

  • Article |

    The design of chemical photoswitches could potentially lead to the development of novel therapeutics that regulates neurotransmission. In this study, a light-sensitive modified derivative of propofol is shown to activate GABAA receptors in Xenopusoocytes, rat ganglion cells and mouse cerebellar slices.

    • Lan Yue
    • , Michal Pawlowski
    •  & David R. Pepperberg

  • Article |

    The analysis of food web properties under different environmental conditions informs us how the ecosystem functions. Here, Tunneyet al. use post-glacial lakes as model ecosystems to show how macroscopic patterns of food webs vary with changes in habitat and resource accessibility.

    • Tyler D. Tunney
    • , Kevin S. McCann
    •  & Brian J. Shuter

  • Article |

    Protein encapsulation in molecular cages has the potential to alter protein function and aid crystallization. Here, ubiquitin is encapsulated within a giant coordination cage; the protein is attached to a bidentate ligand, and the cage self-assembles upon addition of capping ligands and Pd(II) ions.

    • Daishi Fujita
    • , Kosuke Suzuki
    •  & Makoto Fujita

  • Article
    | Open Access

    The efficiency of reprogramming somatic cells to induced pluripotent stem cells is low. To enhance reprogramming efficiency, Li and Rana used a chemical screen and identified several kinase inhibitors that enhance reprogramming, and show that blocking Aurora A, p38 and inositiol triphosphate 3-kinase signalling is important for this process.

    • Zhonghan Li
    •  & Tariq M. Rana

  • Article
    | Open Access

    Heart failure is often a consequence of pathological growth of cardiomyocytes or cardiac hypertrophy. Here Ucar and colleagues report that the microRNAs miR-132 and miR-212 promote cardiac hypertrophy and inhibit autophagy in cardiomyocytes by downregulating the transcription factor FoxO3.

    • Ahmet Ucar
    • , Shashi K. Gupta
    •  & Thomas Thum

  • Article
    | Open Access

    Current methods for detecting proliferation in live cells cannot distinguish between dividing cells and cells that are progressing through the cell cycle. Here, a method is described that detects anillin in the contractile ring and in the midbody of cells during M-phase, providing a more accurate detection of dividing cells.

    • Michael Hesse
    • , Alexandra Raulf
    •  & Bernd K. Fleischmann

  • Article
    | Open Access

    Fragile X syndrome is a major genetic cause of autism and is caused by loss of the fragile X mental retardation protein. In a mouse model of fragile X syndrome, Junget al. show that an absence of neuronal endocannabinoid signalling is responsible for the neurophysiological and behavioural defects.

    • Kwang-Mook Jung
    • , Marja Sepers
    •  & Olivier J. Manzoni

  • Article |

    Vascular calcification is commonly associated with advanced stages of atherosclerosis. Woldtet al. show that the nuclear hormone receptor PPARγ in vascular smooth muscle cells protects mice from vascular calcification by inhibiting Wnt5a signalling triggered by activation of the cell-surface receptor LRP1.

    • Estelle Woldt
    • , Jérome Terrand
    •  & Philippe Boucher

  • Article
    | Open Access

    Human embryonic stem cell cultures are morphologically heterogeneous. Here, differences in Wnt signalling are shown to contribute to this heterogeneity, cells containing high levels of Wnt form endodermal and cardiac cells, whereas cells with low Wnt form neuroectodermal cells, when differentiation is induced.

    • Timothy A. Blauwkamp
    • , Shelly Nigam
    •  & Roel Nusse

  • Article |

    The evolution of venom toxins is an area of intense study but has been hampered by the lack of non-toxin protein homologues. Here, phylogenetic analyses of non-toxin genes sourced from transcriptomic studies are found placed within groups of venom toxins, revealing dynamic changes in the sites of toxin expression.

    • Nicholas R. Casewell
    • , Gavin A. Huttley
    •  & Wolfgang Wüster

  • Article
    | Open Access

    Seizure activity in the brain is characterized by the recruitment of cortical neuronal activity. Schevon and colleagues study seizure activity in human subjects and find that the recruitment of neurons is hypersynchronous and that there is an intrinsic restraint on the propagation of this activity.

    • Catherine A. Schevon
    • , Shennan A. Weiss
    •  & Andrew J. Trevelyan

  • Article |

    TGF-β signalling suppresses tumorigenesis in breast cancer cells but its effects on breast cancer initiating cells have not been reported. Using cells in culture, Brunaet al. show that TGF-β increases breast cancer initiating cell numbers in cells that have low levels of the tight junction protein claudin.

    • Alejandra Bruna
    • , Wendy Greenwood
    •  & Carlos Caldas

  • Article |

    The pulvinar nucleus is involved in modulating visual information. Fischer and Whitney use brain imaging to study the pulvinar during visual attention, and find that the positions and orientations of attended objects are precisely encoded in the pulvinar, while information about ignored objects is gated out.

    • Jason Fischer
    •  & David Whitney

  • Article |

    Microscopic imaging techniques have a high spatio-temporal resolution but, in living animals, are hampered by cardiac and respiratory motion. This paper describes a microscopic setup that allows fluorescent confocal imaging of the beating mouse heart over a period of several hours.

    • Sungon Lee
    • , Claudio Vinegoni
    •  & Ralph Weissleder

  • Article
    | Open Access

    Environmental factors can influence one's susceptibility to cancer, but it is not clear whether such an influence extends beyond the directly exposed generations. Here, feeding pregnant rats with a high-fat diet or a hormone derivative, the authors observe increased breast cancer risk in up to three subsequent generations.

    • Sonia de Assis
    • , Anni Warri
    •  & Leena Hilakivi-Clarke

  • Article
    | Open Access

    Cyclin B–Cdk1 is thought to be synonymous with the promoting factor that drives entry into M-phase of the cell cycle. Here, Greatwall kinase is shown to be required for the breakdown of the nuclear envelope and the assembly of the spindle on entry into M-phase, suggesting that it too is a part of the M-phase-promoting factor.

    • Masatoshi Hara
    • , Yusuke Abe
    •  & Takeo Kishimoto

  • Article |

    The iron–sulphur enzyme IspH catalyses the final step of the methylerythritol phosphate isoprenoid biosynthesis pathway. Spanet al. report that IspH can hydrate acetylenes to aldehydes and ketones, in addition to its role as a 2H+/2e−reductase.

    • Ingrid Span
    • , Ke Wang
    •  & Michael Groll

  • Article |

    The paratympanic organ in the avian middle ear is similar to the fish spiracular organ, but its developmental origin is unresolved. O'Neillet al. use fate mapping techniques to show that the avian paratympanic organ and its afferent neurons arise from a previously undiscovered neurogenic placode.

    • Paul O'Neill
    • , Siu-Shan Mak
    •  & Clare V.H. Baker

  • Article |

    Sex pheromones are used by adult members of a species to attract a mate. This study proposes that the larvae of the cotton leafwormSpodoptera littoralisare attracted to sex pheromones and prefer a food source containing it, suggesting an alternative use of the sex pheromone to trigger food search in caterpillars.

    • Erwan Poivet
    • , Kacem Rharrabe
    •  & Emmanuelle Jacquin-Joly

  • Article |

    Methyltransferases modify cellular proteins in addition to DNA and histones. These authors identify a new family of lysine-specific methyltransferases and show that a member of this family, which is associated with tumour metastasis, methylates the ATP-dependent protein chaperone VCP/p97.

    • Stefan Kernstock
    • , Erna Davydova
    •  & Pål Ø. Falnes

  • Article
    | Open Access

    Many drugs exist that target the β-adrenergic receptor, but they have different efficacies. Kofukuet al. use NMR to show that methionine 82 in the transmembrane domain undergoes conformational changes depending on whether agonists or inverse agonists are bound, explaining the differential drug efficacy.

    • Yutaka Kofuku
    • , Takumi Ueda
    •  & Ichio Shimada

  • Article |

    Methane is an important anthropogenic greenhouse gas and is thought to be produced by industrial processes and prokaryotic methanogenic Archaea. In this study, the saprotrophic fungi,Basidiomycetes, is shown to produce methane in the absence of methanogenic Archaea.

    • Katharina Lenhart
    • , Michael Bunge
    •  & Frank Keppler

  • Article |

    Supramolecular interactions allow some small molecules to self-assemble into nanofibres and hydrogels in aqueous environments. Gaoet al.report a hydrogelator that forms fluorescent nanofibres within cells, leading to the visualization of their self-assembly at the endoplasmic reticulum.

    • Yuan Gao
    • , Junfeng Shi
    •  & Bing Xu

  • Article |

    Calcium-sensing fluorescent proteins such as TN-XXL are valuable tools for studying cellular function but, when expressed in mice, may affect animal physiology and behaviour. The authors of this paper create transgenic mice expressing TN-XXL and show that long-term expression of TN-XXL is tolerated well.

    • Stephan Direnberger
    • , Marsilius Mues
    •  & Oliver Griesbeck

  • Article |

    Vesicle trafficking in the cell is likely to involve a tug-of-war between motor proteins of opposing directionality. Guet al. use high-speed single-particle tracking in neurons to uncover rotation of paused cargo vesicles, providing insight into the changing forces as the vesicles change direction.

    • Yan Gu
    • , Wei Sun
    •  & Ning Fang

  • Article
    | Open Access

    Semi-automated imaging systems help with the task of classifying large numbers of biological images. This study presents a novel framework—CARTA—with an active learning algorithm combined with a genetic algorithm, whose applications include the classification of magnetic resonance imaging of cancer cells.

    • Natsumaro Kutsuna
    • , Takumi Higaki
    •  & Seiichiro Hasezawa

  • Article |

    Speech is encoded by the firing patterns of speech-controlling neurons in different regions of the brain, which Tankus and colleagues analyse in this study. They find highly specific encoding of vowels in medial–frontal neurons and nonspecific tuning in superior temporal gyrus neurons.

    • Ariel Tankus
    • , Itzhak Fried
    •  & Shy Shoham

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