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| Open AccessSwitching action modes of miR408-5p mediates auxin signaling in rice
miR408-5p typically regulates target IAA30 via translation repression, but switches to cleaving IAA30 mRNA under high auxin conditions. miR393, miR156, miR408-5p and their targets could hierarchically act in auxin pathway and regulate leaf inclination.
- Fuxi Rong
- , Yusong Lv
- & Liang Wu
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Article
| Open AccessMicroRNA156 conditions auxin sensitivity to enable growth plasticity in response to environmental changes in Arabidopsis
Plants respond to light and temperature changes via the photoreceptor phytochrome B and the phytohormone auxin. Here the authors reveal microRNA156 as a previously uncharacterized developmental signal that gates environmentally regulated plant growth by licensing auxin sensitivity.
- Qing Sang
- , Lusheng Fan
- & Xuemei Chen
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Article
| Open AccessSpecification of female germline by microRNA orchestrated auxin signaling in Arabidopsis
In most flowering plants, a single megaspore mother cell (MMC) is formed in each ovule. Here the authors show that miR160 and the auxin response factor ARF17 act to promote MMC fate via SPL/NZZ and control auxin signaling to prevent somatic cells from acquiring MMC fate.
- Jian Huang
- , Lei Zhao
- & Dazhong Zhao
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Article
| Open AccessRegulation of AUXIN RESPONSE FACTOR condensation and nucleo-cytoplasmic partitioning
Auxin-driven transcriptional responses are mediated by ARF transcription factors. Here the authors characterize an F-box protein, AFF1, that regulates the accumulation, condensation, and nucleo-cytoplasmic partitioning of ARF19 and ARF7.
- Hongwei Jing
- , David A. Korasick
- & Lucia C. Strader
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| Open AccessThe main oxidative inactivation pathway of the plant hormone auxin
Auxin inactivation plays important roles in plant development. Here the authors show that the main route of IAA inactivation in Arabidopsis is via conjugation by GH3 IAA-amidosynthetases followed by DAO1 dioxygenase-mediated oxidation of the conjugated forms and hydrolysis by ILR1 to release inactive oxIAA.
- Ken-ichiro Hayashi
- , Kazushi Arai
- & Kosuke Fukui
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Article
| Open AccessLocal auxin biosynthesis acts downstream of brassinosteroids to trigger root foraging for nitrogen
Flowering plants elongate their lateral roots under mild nitrogen deficiency to enhance nutrient acquisition. Here the authors show that natural variation of this response depends on local auxin biosynthesis that acts downstream of brassinosteroids to determine lateral root extension.
- Zhongtao Jia
- , Ricardo F. H. Giehl
- & Nicolaus von Wirén
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Article
| Open AccessCoordination of biradial-to-radial symmetry and tissue polarity by HD-ZIP II proteins
The apical style in Arabidopsis is formed following a bilateral-to-radial symmetry transition in the gynoecium. Here the authors show that the final step in style radialization is coordinated by the adaxial regulators HAT3 and ATHB4, which are induced by the SPT and HEC transcription factors.
- Monica Carabelli
- , Luana Turchi
- & Laila Moubayidin
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| Open AccessCell kinetics of auxin transport and activity in Arabidopsis root growth and skewing
Auxin gradients regulate plant root growth and development. Here the authors manipulate auxin synthesis in specific root cell types and use single-cell nucleus tracking and morphokinetics to map directional auxin flow in the root and quantify the kinetics of meristem skewing.
- Yangjie Hu
- , Moutasem Omary
- & Eilon Shani
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Article
| Open AccessLocal auxin competition explains fragmented differentiation patterns
Sieve element differentiation in Arabidopsis roots requires two antagonistic regulators of auxin efflux, BRX and PAX. Here the authors show that together they coordinate sieve element formation by preventing cell fate bistability emerging from AUX1-mediated competition for auxin between neighboring cells.
- Bernard Moret
- , Petra Marhava
- & Kirsten H. W. ten Tusscher
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| Open AccessSYNERGISTIC ON AUXIN AND CYTOKININ 1 positively regulates growth and attenuates soil pathogen resistance
Cytokinin and auxin are two major hormonal regulators of plant growth. Here the authors identify SYAC1, a gene that is synergistically activated by the two hormones being applied together, and show that it is required for normal growth while negatively impacting pathogen resistance.
- Andrej Hurný
- , Candela Cuesta
- & Eva Benková
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Article
| Open AccessA phosphorylation-based switch controls TAA1-mediated auxin biosynthesis in plants
Precise regulation of auxin concentration via transport and metabolism determines the developmental fate of plant tissues. Here the authors show that local auxin biosynthesis is regulated by TMK4-dependent phosphorylation of the TAA1 enzyme and that this is required for proper root development.
- Qian Wang
- , Guochen Qin
- & Tongda Xu
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Article
| Open AccessWUSCHEL acts as an auxin response rheostat to maintain apical stem cells in Arabidopsis
Spatial control of auxin signaling maintains a balance between stem-cell self-renewal and differentiation at the plant shoot apex. Here Ma et al. show that rheostatic control of auxin response by the WUSCHEL transcription factor maintains stem cells by conferring resistance to auxin mediated differentiation.
- Yanfei Ma
- , Andrej Miotk
- & Jan U. Lohmann
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Article
| Open AccessAuxin-sensitive Aux/IAA proteins mediate drought tolerance in Arabidopsis by regulating glucosinolate levels
Brassicaceae produce glucosinolates to protect against herbivory and pathogens. Here the authors show that auxin-sensitive Aux/IAA repressor proteins regulate aliphatic glucosinolate levels in Arabidopsis and this promotes stomatal closure via reactive oxygen species during drought stress.
- Mohammad Salehin
- , Baohua Li
- & Mark Estelle
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Article
| Open AccessOrthogonal regulation of phytochrome B abundance by stress-specific plastidial retrograde signaling metabolite
MEcPP is an evolutionarily conserved metabolite that acts as a plastid-to-nucleus retrograde signal to regulate adaptive responses to fluctuating light. Here the authors show that MEcPP regulates seedling development by stabilizing the phyB photoreceptor in an auxin and Ca2+ dependent manner.
- Jishan Jiang
- , Liping Zeng
- & Katayoon Dehesh
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Article
| Open AccessThe DNA binding landscape of the maize AUXIN RESPONSE FACTOR family
AUXIN RESPONSE FACTORS (ARFs) are a family of plant-specific transcriptional factors involved in auxin signaling. Here, the authors adapt DAP-seq technology to show the binding landscape of 14 maize ARFs and reveal class-specific binding properties and transcriptional coordination by ARFs from different classes.
- Mary Galli
- , Arjun Khakhar
- & Andrea Gallavotti
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Article
| Open AccessA transportome-scale amiRNA-based screen identifies redundant roles of Arabidopsis ABCB6 and ABCB20 in auxin transport
Characterizing plant membrane transporters via genetic methods is complicated by functional redundancy among multi-gene transporter families. Here Zhang et al. use an artificial microRNA-based screen to overcome this issue and show that ABCB6 and ABCB20 act redundantly to regulate auxin transport.
- Yuqin Zhang
- , Victoria Nasser
- & Eilon Shani
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| Open AccessRice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate
Plant root architecture can adapt to different nutrient conditions in the soil. Here Giri et al. show that the rice auxin influx carrier AUX1 mobilizes auxin from the root apex to the differentiation zone and promotes root hair elongation when roots encounter low external phosphate.
- Jitender Giri
- , Rahul Bhosale
- & Malcolm J. Bennett
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| Open AccessA mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate
Plant root hairs elongate in response to low soil phosphate. Here Bhosale et al. show that root hair elongation requires auxin synthesis mediated by TAA1, auxin transport by AUX1 in the lateral root cap and epidermis, and signaling via the auxin-inducible ARF19, RSL2 and RSL4 transcription factors.
- Rahul Bhosale
- , Jitender Giri
- & Ranjan Swarup
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| Open AccessAUX1-mediated root hair auxin influx governs SCFTIR1/AFB-type Ca2+ signaling
Auxin regulates multiple aspects of plant growth and development. Here Dindas et al. show that in root-hair cells, the AUX1 auxin influx carrier mediates proton-driven auxin import that is perceived by auxin receptors and coupled to Ca2+ waves that may modulate adaptive responses in the root.
- Julian Dindas
- , Sönke Scherzer
- & Rainer Hedrich
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Article
| Open AccessSpatial specificity of auxin responses coordinates wood formation
Auxin activity controls plant stem cell function. Here the authors show that in the cambium, moderate auxin activity restricts cambial stem cell number via ARF5-dependent repression of the stem‐cell‐promoting factor WOX4, while ARF3 and ARF4 promote cambial activity outside of the WOX4‐expression domain.
- Klaus Brackmann
- , Jiyan Qi
- & Thomas Greb
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| Open AccessFine-tuning of auxin homeostasis governs the transition from floral stem cell maintenance to gynoecium formation
In Arabidopsis, the timing of floral meristem termination is determined by AGAMOUS. Here, the authors show that the CRC transcription factor, itself a direct target of AGAMOUS, coordinates meristem termination with subsequent gynoecium formation partly by repressing TRN2 expression and regulating auxin homeostasis.
- Nobutoshi Yamaguchi
- , Jiangbo Huang
- & Toshiro Ito
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| Open AccessVariation in auxin sensing guides AUX/IAA transcriptional repressor ubiquitylation and destruction
The phytohormone auxin is sensed by SCFTIR1-AUX/IAA receptors leading to AUX/IAA repressor ubiquitylation and turnover. Here the authors show that IAA6 and IAA19 differ in their ubiquitylation and turnover dynamics, differentially contributing to auxin sensing and enabling discrimination of auxin concentrations.
- Martin Winkler
- , Michael Niemeyer
- & Luz Irina A. Calderón Villalobos
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Article
| Open AccessArabidopsis seed germination speed is controlled by SNL histone deacetylase-binding factor-mediated regulation of AUX1
Histone acetylation influences the speed of seed germination. Here, Wang et al. show that loss of the SNL1/SNL2 histone deacetylase binding factors accelerates seed germination and provide evidence that they act by regulating the expression of AUX1which in turn influences cell division.
- Zhi Wang
- , Fengying Chen
- & Yongxiu Liu
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Article
| Open AccessEnrichment of hydroxylated C24- and C26-acyl-chain sphingolipids mediates PIN2 apical sorting at trans-Golgi network subdomains
Sphingolipids in the trans-Golgi network have been implicated in polar trafficking. Here Wattelet-Boyer et al. show that hydroxylated C24- and C26-acyl-chain sphingolipids are enriched in trans-Golgi network subdomains that are critical for polar sorting of the PIN2 auxin carrier in plant cells.
- Valérie Wattelet-Boyer
- , Lysiane Brocard
- & Yohann Boutté
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| Open AccessA coherent transcriptional feed-forward motif model for mediating auxin-sensitive PIN3 expression during lateral root development
Lateral root development is dependent on precise control of the distribution of the plant hormone auxin. Here Chen et al. propose the transcription factors ARF7 and FLP participate in a feed forward motif to mediate expression of the auxin transporter PIN3and consequently regulate lateral root development.
- Qian Chen
- , Yang Liu
- & Steffen Vanneste
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Cytokinin response factors regulate PIN-FORMED auxin transporters
The concerted action of the hormones cytokinin and auxin is an important regulator of plant development. Here Šimášková et al. propose a mechanistic basis by which cytokinin-responsive transcription factors regulate transport of auxin in Arabidopsisroots.
- Mária Šimášková
- , José Antonio O’Brien
- & Eva Benková
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Peptidyl-prolyl isomerization targets rice Aux/IAAs for proteasomal degradation during auxin signalling
Auxin signalling requires the degradation of Aux/IAA transcriptional repressors which is mediated by their interaction with F-box proteins. Jing et al. show that in rice, OsIAA11 interaction with the F-box protein TIR1 is enhanced by cyclophilin-dependent cis/transisomerisation of the repressor.
- Hongwei Jing
- , Xiaolu Yang
- & Jianru Zuo
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FCA mediates thermal adaptation of stem growth by attenuating auxin action in Arabidopsis
The PIF4 transcription factor promotes stem elongation by inducing auxin biosynthesis at elevated temperature in Arabidopsis. Here, Lee et al.show that the RNA-binding protein FCA attenuates PIF4 activity by promoting its dissociation from the promoter of a gene encoding an auxin biosynthetic enzyme.
- Hyo-Jun Lee
- , Jae-Hoon Jung
- & Chung-Mo Park
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The Arabidopsis transcription factor bZIP11 activates auxin-mediated transcription by recruiting the histone acetylation machinery
Histone acetylation has been proposed to be crucial for the regulation of gene transcription controlled by the plant hormone auxin. Here, the authors show that the bZIP11 transcription factor activates auxin-mediated transcription by recruiting the histone acetylation machinery.
- Christoph Weiste
- & Wolfgang Dröge-Laser
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Structural basis for oligomerization of auxin transcriptional regulators
The transcriptional effects of auxin signalling are mediated by auxin response factors (ARFs) that interact with inhibitory IAA proteins. Nanao et al.present the crystal structure of domain III/IV of ARF5, revealing the structural basis for its interaction with IAAs and its potential to trigger ARF5 oligomerization.
- Max H. Nanao
- , Thomas Vinos-Poyo
- & Renaud Dumas
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Auxin transport and activity regulate stomatal patterning and development
Stomata regulate gas exchange between plants and the atmosphere but whether the plant hormone auxin regulates stomatal development has not been investigated. Here, the authors reveal dynamic changes of auxin activity levels during stomatal development and show that auxin transporters are required for stomatal patterning.
- Jie Le
- , Xu-Guang Liu
- & Fred Sack
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Article
| Open AccessArabidopsis WAT1 is a vacuolar auxin transport facilitator required for auxin homoeostasis
The plant hormone auxin is essential for plant development and growth and is transported across cellular membranes via specialized transporter proteins. In this study, Ranocha et al. identify the first vacuolar auxin transporter, WAT1, suggesting an involvement of the vacuole in auxin signalling.
- Philippe Ranocha
- , Oana Dima
- & Deborah Goffner
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Auxin-Binding Protein 1 is a negative regulator of the SCFTIR1/AFB pathway
The plant hormone auxin controls growth and development, and is recognized by auxin-binding protein 1 (ABP1) and other receptors. In this study, Tromas et al.investigate the role of ABP1 and show that the protein functions upstream of other auxin receptors and controls auxin repressors via the SCF ubiquitin ligase pathway.
- Alexandre Tromas
- , Sébastien Paque
- & Catherine Perrot-Rechenmann
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| Open AccessER-localized auxin transporter PIN8 regulates auxin homeostasis and male gametophyte development in Arabidopsis
Plant hormones, such as auxin, coordinate plant development. In this study, an auxin transporter—PIN8—that is expressed in the male gametophyte ofArabidopsis thaliana, is found to regulate cellular homoeostasis and maintain optimal levels of auxin for pollen development.
- Zhaojun Ding
- , Bangjun Wang
- & Jiří Friml