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A cellular segmentation algorithm with fast customization

Common cellular segmentation models based on machine learning perform suboptimally for test images that differ greatly from training images. Cellpose 2.0 allows biologists to quickly train state-of-the-art segmentation models on their own imaging data. This was previously only possible using large, annotated datasets and required expert machine learning knowledge.

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Fig. 1: Human-in-the-loop training pipeline.

References

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This is a summary of: Pachitariu, M. & Stringer, C. Cellpose 2.0: how to train your own model. Nat. Methods https://doi.org/10.1038/s41592-022-01663-4 (2022).

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A cellular segmentation algorithm with fast customization. Nat Methods 19, 1536–1537 (2022). https://doi.org/10.1038/s41592-022-01664-3

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